diff --git a/SciPost_v1/settings/base.py b/SciPost_v1/settings/base.py
index 4083889191653f3b3464621e2b8374370f43dd47..861544adb28ad4486484f1974dffafa2cb563a9a 100644
--- a/SciPost_v1/settings/base.py
+++ b/SciPost_v1/settings/base.py
@@ -240,6 +240,7 @@ JOURNALS_DIR = 'journals'
CROSSREF_LOGIN_ID = ''
CROSSREF_LOGIN_PASSWORD = ''
+DOAJ_API_KEY = ''
# Google reCaptcha with Google's global test keys
# https://developers.google.com/recaptcha/docs/faq#id-like-to-run-automated-tests-with-recaptcha-v2-what-should-i-do
diff --git a/SciPost_v1/settings/production.py b/SciPost_v1/settings/production.py
index b6f220c85893695023746f93a09ea40c130f7c14..ab2cfb01f139d2fd78784cccc683cbfb7267adc6 100644
--- a/SciPost_v1/settings/production.py
+++ b/SciPost_v1/settings/production.py
@@ -38,6 +38,7 @@ SERVER_EMAIL = get_secret("SERVER_EMAIL")
# Other
CROSSREF_LOGIN_ID = get_secret("CROSSREF_LOGIN_ID")
CROSSREF_LOGIN_PASSWORD = get_secret("CROSSREF_LOGIN_PASSWORD")
+DOAJ_API_KEY = get_secret("DOAJ_API_KEY")
HAYSTACK_CONNECTIONS['default']['PATH'] = '/home/jscaux/webapps/scipost/SciPost_v1/whoosh_index'
MAILCHIMP_API_USER = get_secret("MAILCHIMP_API_USER")
MAILCHIMP_API_KEY = get_secret("MAILCHIMP_API_KEY")
diff --git a/journals/admin.py b/journals/admin.py
index 167b0f62e4f1dadb5dcecaff88dc8d128c367ad5..a128f6021b845ab370c588f7dd4f71597c0af4ed 100644
--- a/journals/admin.py
+++ b/journals/admin.py
@@ -1,7 +1,8 @@
from django.contrib import admin, messages
from django import forms
-from journals.models import UnregisteredAuthor, Journal, Volume, Issue, Publication, Deposit
+from journals.models import UnregisteredAuthor, Journal, Volume, Issue, Publication, \
+ Deposit, CLOCKSSmetadata, DOAJDeposit
from scipost.models import Contributor
from submissions.models import Submission
@@ -79,3 +80,8 @@ class DepositAdmin(admin.ModelAdmin):
admin.site.register(Deposit, DepositAdmin)
+
+
+admin.site.register(CLOCKSSmetadata)
+
+admin.site.register(DOAJDeposit)
diff --git a/journals/constants.py b/journals/constants.py
index 6bd5de5cf9a4285d253a22a9bbb638efde5396f0..7db8b8c2a556c43aaddb121825a6ec209746412e 100644
--- a/journals/constants.py
+++ b/journals/constants.py
@@ -56,3 +56,12 @@ ISSUE_STATUSES = (
(STATUS_DRAFT, 'Draft'),
(STATUS_PUBLISHED, 'Published'),
)
+
+CCBY4 = 'CC BY 4.0'
+CCBYSA4 = 'CC BY-SA 4.0'
+CCBYNC4 = 'CC BY-NC 4.0'
+CC_LICENSES = (
+ (CCBY4, 'CC BY (4.0)'),
+ (CCBYSA4, 'CC BY-SA (4.0)'),
+ (CCBYNC4, 'CC BY-NC (4.0)'),
+)
diff --git a/journals/migrations/0031_clockssmetadata.py b/journals/migrations/0031_clockssmetadata.py
new file mode 100644
index 0000000000000000000000000000000000000000..e9f252ab1d59866c6a86176dd8eebf6abdd03841
--- /dev/null
+++ b/journals/migrations/0031_clockssmetadata.py
@@ -0,0 +1,24 @@
+# -*- coding: utf-8 -*-
+# Generated by Django 1.10.3 on 2017-07-11 03:34
+from __future__ import unicode_literals
+
+from django.db import migrations, models
+import django.db.models.deletion
+
+
+class Migration(migrations.Migration):
+
+ dependencies = [
+ ('journals', '0030_auto_20170710_1051'),
+ ]
+
+ operations = [
+ migrations.CreateModel(
+ name='CLOCKSSmetadata',
+ fields=[
+ ('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
+ ('metadata_xml_file_CLOCKSS', models.FileField(blank=True, max_length=512, null=True, upload_to='')),
+ ('publication', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='journals.Publication')),
+ ],
+ ),
+ ]
diff --git a/journals/migrations/0032_auto_20170711_0952.py b/journals/migrations/0032_auto_20170711_0952.py
new file mode 100644
index 0000000000000000000000000000000000000000..25f177b24634e1d976dbad6b66e3b292b83133b5
--- /dev/null
+++ b/journals/migrations/0032_auto_20170711_0952.py
@@ -0,0 +1,19 @@
+# -*- coding: utf-8 -*-
+# Generated by Django 1.10.3 on 2017-07-11 07:52
+from __future__ import unicode_literals
+
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+ dependencies = [
+ ('journals', '0031_clockssmetadata'),
+ ]
+
+ operations = [
+ migrations.AlterModelOptions(
+ name='clockssmetadata',
+ options={'verbose_name': 'CLOCKSS metadata'},
+ ),
+ ]
diff --git a/journals/migrations/0033_auto_20170711_2041.py b/journals/migrations/0033_auto_20170711_2041.py
new file mode 100644
index 0000000000000000000000000000000000000000..7c77db3e5381b1873623fa4f1e9606ae3af30e7e
--- /dev/null
+++ b/journals/migrations/0033_auto_20170711_2041.py
@@ -0,0 +1,41 @@
+# -*- coding: utf-8 -*-
+# Generated by Django 1.10.3 on 2017-07-11 18:41
+from __future__ import unicode_literals
+
+import django.contrib.postgres.fields.jsonb
+from django.db import migrations, models
+import django.db.models.deletion
+
+
+class Migration(migrations.Migration):
+
+ dependencies = [
+ ('journals', '0032_auto_20170711_0952'),
+ ]
+
+ operations = [
+ migrations.CreateModel(
+ name='DOAJDeposit',
+ fields=[
+ ('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
+ ('timestamp', models.CharField(default='', max_length=40)),
+ ('metadata_DOAJ', django.contrib.postgres.fields.jsonb.JSONField()),
+ ('deposition_date', models.DateTimeField(blank=True, null=True)),
+ ('response_text', models.TextField(blank=True, null=True)),
+ ('deposit_successful', models.NullBooleanField(default=None)),
+ ],
+ options={
+ 'verbose_name': 'DOAJ deposit',
+ },
+ ),
+ migrations.AddField(
+ model_name='publication',
+ name='metadata_DOAJ',
+ field=django.contrib.postgres.fields.jsonb.JSONField(blank=True, null=True),
+ ),
+ migrations.AddField(
+ model_name='doajdeposit',
+ name='publication',
+ field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='journals.Publication'),
+ ),
+ ]
diff --git a/journals/migrations/0034_publication_cc_license.py b/journals/migrations/0034_publication_cc_license.py
new file mode 100644
index 0000000000000000000000000000000000000000..b23b2c997bd72c6252c82999dd57c112826b2a28
--- /dev/null
+++ b/journals/migrations/0034_publication_cc_license.py
@@ -0,0 +1,20 @@
+# -*- coding: utf-8 -*-
+# Generated by Django 1.10.3 on 2017-07-12 06:10
+from __future__ import unicode_literals
+
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+ dependencies = [
+ ('journals', '0033_auto_20170711_2041'),
+ ]
+
+ operations = [
+ migrations.AddField(
+ model_name='publication',
+ name='cc_license',
+ field=models.CharField(choices=[('CC BY 4.0', 'CC BY (4.0)'), ('CC BY-SA 4.0', 'CC BY-SA (4.0)'), ('CC BY-NC 4.0', 'CC BY-NC (4.0)')], default='CC BY 4.0', max_length=32),
+ ),
+ ]
diff --git a/journals/models.py b/journals/models.py
index 3f5454a8f8edf552449f05324e644d8d6cac8718..fe5dee82967a4c6e4b8d7d14bffccc6c3245d4f8 100644
--- a/journals/models.py
+++ b/journals/models.py
@@ -7,7 +7,8 @@ from django.urls import reverse
from .behaviors import doi_journal_validator, doi_volume_validator,\
doi_issue_validator, doi_publication_validator
from .constants import SCIPOST_JOURNALS, SCIPOST_JOURNALS_DOMAINS,\
- STATUS_DRAFT, STATUS_PUBLISHED, ISSUE_STATUSES
+ STATUS_DRAFT, STATUS_PUBLISHED, ISSUE_STATUSES,\
+ CCBY4, CC_LICENSES
from .helpers import paper_nr_string, journal_name_abbrev_citation
from .managers import IssueManager, PublicationManager
@@ -140,9 +141,11 @@ class Publication(models.Model):
related_name='authors_pub_false_claims')
abstract = models.TextField()
pdf_file = models.FileField(upload_to='UPLOADS/PUBLICATIONS/%Y/%m/', max_length=200)
+ cc_license = models.CharField(max_length=32, choices=CC_LICENSES, default=CCBY4)
metadata = JSONField(default={}, blank=True, null=True)
metadata_xml = models.TextField(blank=True, null=True) # for Crossref deposit
latest_metadata_update = models.DateTimeField(blank=True, null=True)
+ metadata_DOAJ = JSONField(blank=True, null=True)
BiBTeX_entry = models.TextField(blank=True, null=True)
doi_label = models.CharField(max_length=200, unique=True, db_index=True,
validators=[doi_publication_validator])
@@ -235,4 +238,36 @@ class Deposit(models.Model):
def __str__(self):
return (self.deposition_date.strftime('%Y-%m-%D') +
- ' for 10.21468/' + self.publication.doi_label)
+ ' for ' + self.publication.doi_label)
+
+
+class CLOCKSSmetadata(models.Model):
+ """
+ For the CLOCKSS archive, JATS formatted XML is produced.
+ """
+ publication = models.ForeignKey(Publication, on_delete=models.CASCADE)
+ metadata_xml_file_CLOCKSS = models.FileField(blank=True, null=True, max_length=512)
+
+ class Meta:
+ verbose_name = 'CLOCKSS metadata'
+
+ def __str__(self):
+ return ('CLOCKSS metadata for ' + self.publication.doi_label)
+
+
+class DOAJDeposit(models.Model):
+ """
+ For the Directory of Open Access Journals.
+ """
+ publication = models.ForeignKey(Publication, on_delete=models.CASCADE)
+ timestamp = models.CharField(max_length=40, default='')
+ metadata_DOAJ = JSONField()
+ deposition_date = models.DateTimeField(blank=True, null=True)
+ response_text = models.TextField(blank=True, null=True)
+ deposit_successful = models.NullBooleanField(default=None)
+
+ class Meta:
+ verbose_name = 'DOAJ deposit'
+
+ def __str__(self):
+ return ('DOAJ deposit for ' + self.publication.doi_label)
diff --git a/journals/templates/journals/manage_metadata.html b/journals/templates/journals/manage_metadata.html
index 2d5ec8c2408bec25d1d633d422a2e865a7dc6f7a..cff6224e24894f7cc100e138777a4a6548faf709 100644
--- a/journals/templates/journals/manage_metadata.html
+++ b/journals/templates/journals/manage_metadata.html
@@ -35,6 +35,8 @@ event: "focusin"
<th>Publication date</th>
<th>Latest metadata update</th>
<th>Latest successful Crossref deposit</th>
+ <th>CLOCKSS</th>
+ <th>DOAJ</th>
</tr>
</thead>
@@ -51,9 +53,11 @@ event: "focusin"
<td>No info available</td>
{% endif %}
<td>{{ publication|latest_successful_crossref_deposit }}</td>
+ <td>{% if publication.clockssmetadata_set.all.exists %}File exists{% else %}File does not exist{% endif %}</td>
+ <td>{{ publication|latest_successful_DOAJ_deposit }}</td>
</tr>
<tr id="collapse{{ publication.id }}" class="collapse" role="tabpanel" aria-labelledby="heading{{ publication.id }}" style="background-color: #fff;">
- <td colspan="4">
+ <td colspan="5">
<h3 class="ml-3">Actions</h3>
<ul>
<li>Mark the first author (currently: {% if publication.first_author %}{{ publication.first_author }} {% elif publication.first_author_unregistered %}{{ publication.first_author_unregistered }} (unregistered){% endif %})
@@ -87,8 +91,11 @@ event: "focusin"
<li><a href="{% url 'journals:create_metadata_xml' publication.doi_label %}">(re)create metadata</a></li>
<li><a href="{% url 'journals:metadata_xml_deposit' publication.doi_label 'test' %}">Test metadata deposit (via Crossref test server)</a></li>
<li><a href="{% url 'journals:metadata_xml_deposit' publication.doi_label 'deposit' %}">Deposit the metadata to Crossref</a></li>
+ <li><a href="{% url 'journals:produce_CLOCKSS_metadata_file' doi_label=publication.doi_label %}">Produce CLOCKSS metadata file</a></li>
+ <li><a href="{% url 'journals:produce_metadata_DOAJ' doi_label=publication.doi_label %}">Produce DOAJ metadata</a></li>
+ <li><a href="{% url 'journals:metadata_DOAJ_deposit' doi_label=publication.doi_label %}">Deposit the metadata to DOAJ</a></li>
</ul>
- <h3 class="ml-3">Deposits</h3>
+ <h3 class="ml-3">Crossref Deposits</h3>
<table class="ml-5">
<thead class="thead-default">
<th>Timestamp</th>
@@ -112,12 +119,42 @@ event: "focusin"
</td>
</tr>
{% empty %}
+ <tr>
+ <td colspan="5">No Deposits found for this publication</td>
+ </tr>
+ {% endfor %}
+ </tbody>
+ </table>
+
+ <h3 class="ml-3">DOAJ Deposits</h3>
+ <table class="ml-5">
+ <thead class="thead-default">
+ <th>Timestamp</th>
+ <th>deposition date</th>
+ <th>Successful?</th>
+ <th>actions</th>
+ </thead>
+ <tbody>
+ {% for deposit in publication.doajdeposit_set.all %}
+ <tr>
+ <td>{{ deposit.timestamp }}</td>
+ <td>{% if deposit.deposition_date %}{{ deposit.deposition_date }}{% else %}Not deposited{% endif %}</td>
+ <td>{{ deposit.deposit_successful }}</td>
+ <td>Mark deposit as
+ <ul>
+ <li><a href="{% url 'journals:mark_doaj_deposit_success' deposit_id=deposit.id success=1 %}">successful</a></li>
+ <li><a href="{% url 'journals:mark_doaj_deposit_success' deposit_id=deposit.id success=0 %}">unsuccessful</a></li>
+ </ul>
+ </td>
+ </tr>
+ {% empty %}
<tr>
<td colspan="4">No Deposits found for this publication</td>
</tr>
{% endfor %}
</tbody>
</table>
+
</td>
</tr>
{% empty %}
diff --git a/journals/templates/journals/publication_metadata_jats.xml b/journals/templates/journals/publication_metadata_jats.xml
new file mode 100644
index 0000000000000000000000000000000000000000..6f97e3fb7fc8eb3b2ef9163e82333ab1b2f95add
--- /dev/null
+++ b/journals/templates/journals/publication_metadata_jats.xml
@@ -0,0 +1,22 @@
+<article dtd-version="1.1d3">
+<front>
+<journal-meta>
+<publisher>
+<publisher-name>SciPost</publisher-name>
+</publisher>
+<issn>{{ publication.in_issue.in_volume.in_journal.issn }}</issn>
+</journal-meta>
+<article-meta>
+<title-group>
+<article-title>{{ publication.title }}</article-title>
+</title-group>
+<article-id pub-id-type="doi">{{ publication.doi_string }}</article-id>
+<volume>{{ publication.in_issue.in_volume.number }}</volume>
+<issue>{{ publication.in_issue.number }}</issue>
+<pub-date publication-format="epub" date-type="pub" iso-8601-date="{{ publication.publication_date|date:'Y-m-d' }}">
+<day>{{ publication.publication_date|date:'d' }}</day>
+<month>{{ publication.publication_date|date:'m' }}</month>
+<year>{{ publication.publication_date|date:'Y' }}</year>
+</pub-date></article-meta>
+</front>
+</article>
diff --git a/journals/templatetags/journals_extras.py b/journals/templatetags/journals_extras.py
index 36ca1920715e306fd6e8ed8cccc0caa6ca998747..d995ca07c160a96cad93d8efab44c91e72bf4dc2 100644
--- a/journals/templatetags/journals_extras.py
+++ b/journals/templatetags/journals_extras.py
@@ -10,10 +10,19 @@ def paper_nr_string_filter(nr):
return paper_nr_string(nr)
@register.filter(name='latest_successful_crossref_deposit')
-def latest_crossref_deposition_date(publication):
+def latest_successful_crossref_deposit(publication):
latest = publication.deposit_set.filter(
deposit_successful=True).order_by('-deposition_date').first()
if latest:
return latest.deposition_date.strftime('%Y-%m-%d')
else:
return "No successful deposit found"
+
+@register.filter(name='latest_successful_DOAJ_deposit')
+def latest_successful_DOAJ_deposit(publication):
+ latest = publication.doajdeposit_set.filter(
+ deposit_successful=True).order_by('-deposition_date').first()
+ if latest:
+ return latest.deposition_date.strftime('%Y-%m-%d')
+ else:
+ return "No successful deposit found"
diff --git a/journals/urls/general.py b/journals/urls/general.py
index 3fd938879af8c5c5c48efd01b797d8f557d29595..eb5dbc91cb505466188ef1aae4e2a55de2472514 100644
--- a/journals/urls/general.py
+++ b/journals/urls/general.py
@@ -7,7 +7,8 @@ from journals import views as journals_views
urlpatterns = [
# Journals
url(r'^$', TemplateView.as_view(template_name='journals/journals.html'), name='journals'),
- url(r'scipost_physics', RedirectView.as_view(url=reverse_lazy('scipost:landing_page', args=['SciPostPhys']))),
+ url(r'scipost_physics', RedirectView.as_view(url=reverse_lazy('scipost:landing_page',
+ args=['SciPostPhys']))),
url(r'^journals_terms_and_conditions$',
TemplateView.as_view(template_name='journals/journals_terms_and_conditions.html'),
name='journals_terms_and_conditions'),
@@ -55,6 +56,18 @@ urlpatterns = [
url(r'^mark_deposit_success/(?P<deposit_id>[0-9]+)/(?P<success>[0-1])$',
journals_views.mark_deposit_success,
name='mark_deposit_success'),
+ url(r'^produce_CLOCKSS_metadata_file/(?P<doi_label>[a-zA-Z]+.[0-9]+.[0-9]+.[0-9]{3,})$',
+ journals_views.produce_CLOCKSS_metadata_file,
+ name='produce_CLOCKSS_metadata_file'),
+ url(r'^produce_metadata_DOAJ/(?P<doi_label>[a-zA-Z]+.[0-9]+.[0-9]+.[0-9]{3,})$',
+ journals_views.produce_metadata_DOAJ,
+ name='produce_metadata_DOAJ'),
+ url(r'^metadata_DOAJ_deposit/(?P<doi_label>[a-zA-Z]+.[0-9]+.[0-9]+.[0-9]{3,})$',
+ journals_views.metadata_DOAJ_deposit,
+ name='metadata_DOAJ_deposit'),
+ url(r'^mark_doaj_deposit_success/(?P<deposit_id>[0-9]+)/(?P<success>[0-1])$',
+ journals_views.mark_doaj_deposit_success,
+ name='mark_doaj_deposit_success'),
url(r'^harvest_citedby_list/$',
journals_views.harvest_citedby_list,
name='harvest_citedby_list'),
diff --git a/journals/utils.py b/journals/utils.py
index b1e7630d7fc7656e2a559f33977dedad3b42f3ba..1f1f0e0bd21261c6a9e11ed714e2036c245da992 100644
--- a/journals/utils.py
+++ b/journals/utils.py
@@ -39,5 +39,48 @@ class JournalUtils(object):
emailmessage.send(fail_silently=False)
@classmethod
- def generate_metadata_xml_file(cls):
+ def generate_metadata_DOAJ(cls):
""" Requires loading 'publication' attribute. """
+ md = {
+ 'bibjson': {
+ 'author': [{'name': cls.publication.author_list}],
+ 'title': cls.publication.title,
+ 'abstract': cls.publication.abstract,
+ 'year': cls.publication.publication_date.strftime('%Y'),
+ 'month': cls.publication.publication_date.strftime('%m'),
+ 'start_page': cls.publication.get_paper_nr(),
+ 'identifier': [
+ {
+ 'type': 'doi',
+ 'id': cls.publication.doi_string
+ }
+ ],
+ 'link': [
+ {
+ 'url': cls.request.build_absolute_uri(cls.publication.get_absolute_url()),
+ 'type': 'fulltext',
+ }
+ ],
+ 'journal': {
+ 'publisher': 'SciPost',
+ 'volume': str(cls.publication.in_issue.in_volume.number),
+ 'number': str(cls.publication.in_issue.number),
+ 'identifier': [{
+ 'type': 'eissn',
+ 'id': str(cls.publication.in_issue.in_volume.in_journal.issn)
+ }],
+ 'license': [
+ {
+ 'url': cls.request.build_absolute_uri(
+ cls.publication.in_issue.in_volume.in_journal.get_absolute_url()),
+ 'open_access': 'true',
+ 'type': cls.publication.get_cc_license_display(),
+ 'title': cls.publication.get_cc_license_display(),
+ }
+ ],
+ 'language': ['EN'],
+ 'title': cls.publication.in_issue.in_volume.in_journal.get_name_display(),
+ }
+ }
+ }
+ return md
diff --git a/journals/views.py b/journals/views.py
index 4eb5a68106b50e0a52caa29f5114ba02f4ffdc2a..6509c95d3d81a5f230dfe27da309d5603ccbe05b 100644
--- a/journals/views.py
+++ b/journals/views.py
@@ -11,17 +11,19 @@ from django.conf import settings
from django.contrib import messages
from django.utils import timezone
from django.shortcuts import get_object_or_404, render, redirect
+from django.template import Context
+from django.template.loader import get_template
from django.db import transaction
from django.http import HttpResponse
from .exceptions import PaperNumberingError
from .helpers import paper_nr_string
-from .models import Journal, Issue, Publication, UnregisteredAuthor
+from .models import Journal, Issue, Publication, UnregisteredAuthor, DOAJDeposit
from .forms import FundingInfoForm, InitiatePublicationForm, ValidatePublicationForm,\
UnregisteredAuthorForm, CreateMetadataXMLForm, CitationListBibitemsForm
from .utils import JournalUtils
-from journals.models import Publication, Deposit
+from journals.models import Deposit, CLOCKSSmetadata
from submissions.models import Submission
from scipost.models import Contributor
@@ -137,7 +139,6 @@ def issue_detail(request, doi_label):
return render(request, 'journals/journal_issue_detail.html', context)
-
#######################
# Publication process #
#######################
@@ -273,7 +274,7 @@ def validate_publication(request):
@permission_required('scipost.can_publish_accepted_submission', return_403=True)
def manage_metadata(request):
- publications = Publication.objects.order_by('-publication_date')
+ publications = Publication.objects.order_by('-publication_date', '-paper_nr')
context = {
'publications': publications
}
@@ -471,11 +472,13 @@ def create_metadata_xml(request, doi_label):
'<body>\n'
'<journal>\n'
'<journal_metadata>\n'
- '<full_title>' + publication.in_issue.in_volume.in_journal.get_name_display() + '</full_title>\n'
+ '<full_title>' + publication.in_issue.in_volume.in_journal.get_name_display()
+ + '</full_title>\n'
'<abbrev_title>'
+ publication.in_issue.in_volume.in_journal.get_abbreviation_citation() +
'</abbrev_title>\n'
- '<issn>' + publication.in_issue.in_volume.in_journal.issn + '</issn>\n'
+ '<issn media_type=\'electronic\'>' + publication.in_issue.in_volume.in_journal.issn
+ + '</issn>\n'
'<doi_data>\n'
'<doi>' + publication.in_issue.in_volume.in_journal.doi_string + '</doi>\n'
'<resource>https://scipost.org/'
@@ -584,6 +587,16 @@ def metadata_xml_deposit(request, doi_label, option='test'):
Makes use of the python requests module.
"""
publication = get_object_or_404(Publication, doi_label=doi_label)
+ timestamp = (publication.metadata_xml.partition(
+ '<timestamp>'))[2].partition('</timestamp>')[0]
+ doi_batch_id = (publication.metadata_xml.partition(
+ '<doi_batch_id>'))[2].partition('</doi_batch_id>')[0]
+ path = (settings.MEDIA_ROOT + publication.in_issue.path + '/'
+ + publication.get_paper_nr() + '/' + publication.doi_label.replace('.', '_')
+ + '_Crossref_' + timestamp + '.xml')
+ if os.path.isfile(path):
+ errormessage = 'The metadata file for this metadata timestamp already exists'
+ return render(request, 'scipost/error.html', context={'errormessage': errormessage})
if option == 'deposit':
url = 'http://doi.crossref.org/servlet/deposit'
elif option == 'test':
@@ -608,22 +621,23 @@ def metadata_xml_deposit(request, doi_label, option='test'):
response_headers = r.headers
response_text = r.text
- # Then, if deposit, create the associated Deposit object (saving the metadata to a file)
- content = ContentFile(publication.metadata_xml)
- timestamp = (publication.metadata_xml.partition(
- '<timestamp>'))[2].partition('</timestamp>')[0]
- doi_batch_id = (publication.metadata_xml.partition(
- '<doi_batch_id>'))[2].partition('</doi_batch_id>')[0]
- path = (settings.MEDIA_ROOT + publication.in_issue.path + '/'
- + publication.get_paper_nr() + '/' + publication.doi_label.replace('.', '_')
- + '_' + timestamp + '.xml')
- deposit = Deposit(publication=publication, timestamp=timestamp, doi_batch_id=doi_batch_id,
- metadata_xml=publication.metadata_xml, deposition_date=timezone.now())
- deposit.metadata_xml_file.save(path, content)
- deposit.response_text = r.text
- deposit.save()
- publication.latest_crossref_deposit = timezone.now()
- publication.save()
+ # Then create the associated Deposit object (saving the metadata to a file)
+ if option == 'deposit':
+ content = ContentFile(publication.metadata_xml)
+ deposit = Deposit(publication=publication, timestamp=timestamp, doi_batch_id=doi_batch_id,
+ metadata_xml=publication.metadata_xml, deposition_date=timezone.now())
+ deposit.metadata_xml_file.save(path, content)
+ deposit.response_text = r.text
+ deposit.save()
+ publication.latest_crossref_deposit = timezone.now()
+ publication.save()
+ # Save a copy to the filename without timestamp
+ path1 = (settings.MEDIA_ROOT + publication.in_issue.path + '/'
+ + publication.get_paper_nr() + '/' + publication.doi_label.replace('.', '_')
+ + '_Crossref.xml')
+ f = open(path1, 'w')
+ f.write(publication.metadata_xml)
+ f.close()
context = {
'option': option,
@@ -645,6 +659,121 @@ def mark_deposit_success(request, deposit_id, success):
return redirect(reverse('journals:manage_metadata'))
+@permission_required('scipost.can_publish_accepted_submission', return_403=True)
+def produce_CLOCKSS_metadata_file(request, doi_label):
+ publication = get_object_or_404(Publication, doi_label=doi_label)
+ context = Context({'publication': publication})
+ xml = get_template('journals/publication_metadata_jats.xml').render(context)
+ content = ContentFile(xml)
+ timestamp = (publication.metadata_xml.partition(
+ '<timestamp>'))[2].partition('</timestamp>')[0]
+ path = (settings.MEDIA_ROOT + publication.in_issue.path + '/'
+ + publication.get_paper_nr() + '/' + publication.doi_label.replace('.', '_')
+ + '_CLOCKSS_' + timestamp + '.xml')
+ if os.path.isfile(path):
+ errormessage = 'The CLOCKSS metadata file for this metadata timestamp already exists'
+ return render(request, 'scipost/error.html', context={'errormessage': errormessage})
+ clockssmeta = CLOCKSSmetadata(publication=publication)
+ clockssmeta.metadata_xml_file_CLOCKSS.save(path, content)
+ clockssmeta.save()
+ # Save a copy to the filename without timestamp
+ path1 = (settings.MEDIA_ROOT + publication.in_issue.path + '/'
+ + publication.get_paper_nr() + '/' + publication.doi_label.replace('.', '_')
+ + '_CLOCKSS.xml')
+ f = open(path1, 'w')
+ f.write(xml)
+ f.close()
+ return redirect(reverse('journals:manage_metadata'))
+
+
+@permission_required('scipost.can_publish_accepted_submission', return_403=True)
+def produce_metadata_DOAJ(request, doi_label):
+ publication = get_object_or_404(Publication, doi_label=doi_label)
+ JournalUtils.load({'request': request, 'publication': publication})
+ publication.metadata_DOAJ = JournalUtils.generate_metadata_DOAJ()
+ publication.save()
+ messages.success(request, '<h3>%s</h3>Successfully produced metadata DOAJ.'
+ % publication.doi_label)
+ return redirect(reverse('journals:manage_metadata'))
+
+
+@permission_required('scipost.can_publish_accepted_submission', return_403=True)
+@transaction.atomic
+def metadata_DOAJ_deposit(request, doi_label):
+ """
+ DOAJ metadata deposit.
+ Makes use of the python requests module.
+ """
+ publication = get_object_or_404(Publication, doi_label=doi_label)
+ if not publication.metadata_DOAJ:
+ messages.warning(request, '<h3>%s</h3>Failed: please first produce '
+ 'DOAJ metadata before depositing.' % publication.doi_label)
+ return redirect(reverse('journals:manage_metadata'))
+
+ timestamp = (publication.metadata_xml.partition(
+ '<timestamp>'))[2].partition('</timestamp>')[0]
+ path = (settings.MEDIA_ROOT + publication.in_issue.path + '/'
+ + publication.get_paper_nr() + '/' + publication.doi_label.replace('.', '_')
+ + '_DOAJ_' + timestamp + '.json')
+ if os.path.isfile(path):
+ errormessage = 'The metadata file for this metadata timestamp already exists'
+ return render(request, 'scipost/error.html', context={'errormessage': errormessage})
+ url = 'https://doaj.org/api/v1/articles'
+
+ params = {
+ 'operation': 'doMDUpload',
+ 'api_key': settings.DOAJ_API_KEY,
+ }
+ files = {'fname': ('metadata.json', publication.metadata_xml, 'application/json')}
+ try:
+ r = requests.post(url, params=params, files=files)
+ r.raise_for_status()
+ except requests.exceptions.HTTPError:
+ messages.warning(request, '<h3>%s</h3>Failed: Post went wrong. Did you set the right '
+ 'DOAJ API KEY?' % publication.doi_label)
+ return redirect(reverse('journals:manage_metadata'))
+
+ # Then create the associated Deposit object (saving the metadata to a file)
+ content = ContentFile(publication.metadata_xml)
+ deposit = DOAJDeposit(publication=publication, timestamp=timestamp,
+ metadata_DOAJ=publication.metadata_DOAJ, deposition_date=timezone.now())
+ deposit.metadata_xml_file.save(path, content)
+ deposit.response_text = r.text
+ deposit.save()
+ publication.latest_crossref_deposit = timezone.now()
+ publication.save()
+
+ # Save a copy to the filename without timestamp
+ path1 = (settings.MEDIA_ROOT + publication.in_issue.path + '/'
+ + publication.get_paper_nr() + '/' + publication.doi_label.replace('.', '_')
+ + '_DOAJ.json')
+ f = open(path1, 'w')
+ f.write(publication.metadata_DOAJ)
+ f.close()
+
+ # response_headers = r.headers
+ # response_text = r.text
+ # context = {
+ # 'publication': publication,
+ # 'response_headers': response_headers,
+ # 'response_text': response_text,
+ # }
+ messages.success(request, '<h3>%s</h3>Successfull deposit of metadata DOAJ.'
+ % publication.doi_label)
+ return redirect(reverse('journals:manage_metadata'))
+
+
+@permission_required('scipost.can_publish_accepted_submission', return_403=True)
+def mark_doaj_deposit_success(request, deposit_id, success):
+ deposit = get_object_or_404(DOAJDeposit, pk=deposit_id)
+ if success == '1':
+ deposit.deposit_successful = True
+ elif success == '0':
+ deposit.deposit_successful = False
+ deposit.save()
+ return redirect(reverse('journals:manage_metadata'))
+
+
@permission_required('scipost.can_publish_accepted_submission', return_403=True)
def harvest_citedby_list(request):
publications = Publication.objects.order_by('-publication_date')